Pathology and Laboratory Medicine

Books and Chapters

Soentjens, P.H.P., Meintjes, G., French, M.A. and Colebunders, R. Immune Reconstitution Inflammatory Syndrome, Emerging Infections 8, ed Scheld, W.M., Hammer, S.M., Hughes, J.M., Washington, DC, ASM Press, pp 355-391 (2008)

Thien, C.B.F. and Langdon, W.Y. Regulation of Immune Cell Signaling by c-Cbl and Cbl-b, CBL Proteins, ed Tsygankov, A., New York, Nova Science Publishers Inc, pp 99-125 (2008)

Journal Articles

Affandi, J.S., Price, P., Imran, D., Yunihastuti, E., Djauzi, S. and Cherry, C.L. Can We Predict Neuropathy Risk before Stavudine Prescription in a Resource-Limited Setting?, AIDS Research and Human Retroviruses, 24:10, pp 1281-1284 (2008)

Azzam, D.G., Tay, J.W.T., Greeve, M.A., Harvey, J.M. and Bentel, J.M. ERK/MAPK Regulation of the Androgen Responsiveness of Breast Cancer Cells, Advances in Experimental Medicine and Biology, 617: pp 429-435 (2008)

Bates, T.R., Burnett, J.R., van Bockxmeer, F.M., Hamilton, S.J., Arnolda, L.F. and Watts, G.F. Detection of Familial Hypercholesterolaemia: A Major Treatment Gap in Preventative Cardiology, Heart, Lung and Circulation, 17: pp 411-413 (2008)

Carter, K.W., Hung, J., Powell, B.L., Wiltshire, S., Foo, B.T.X., Leow, Y.C., McQuillan, B.M., Jennens, M., McCaskie, P.A., Thompson, P.L., Beilby, J.P. and Palmer, L.J. Association of Interleukin-1 gene polymorphisms with central obesity and metabolic syndrome in a coronary heart disease population, Human Genetics, 124: pp 199-206 (2008)

Chan, D.C., Watts, G.F., Wang, J., Hegele, R.A., van Bockxmeer, F.M. and Barrett, P.H.R. Variation in Niemann-Pick C1-like 1 gene as a determinant of apolipoprotein B-100 kinetics and response to statin therapy in centrally obese men, Clinical Endocrinology, 69: pp 45-51 (2008)

Cherry, C.L., Rosenow, A.A., Affandi, J.S., McArthur, J.C., Wesselingh, S.L. and Price, P. Cytokine Genotype Suggests a Role for Inflammation in Nucleoside Analog-Associated Sensory Neuropathy (NRTI-SN) and Predicts an Individual's NRTI-SN Risk, AIDS Research and Human Retroviruses, 24:2, pp 117-123 (2008)

Chih, S., McQuillan, B.M., Kaye, J., Beilby, J.P. and Hung, J. Abnormal glucose regulation in an Australian acute coronary syndrome population: A prospective study, Diabetes Research and Clinical Practice, 81: pp 303-309 (2008)

Creaney, J., Segal, A., Sterrett, G., Platten, M.A., Baker, E., Murch, A.R., Nowak, A.K., Robinson, B.W.S. and Millward, M.J. Overexpression and altered glycosylation of MUC1 in malignant mesothelioma, British Journal of Cancer, 98: pp 1562-1569 (2008)

Danesh, J., Hingorani, A., Wensley, F., Casas, J.P., Smeeth, L., Samani, N.J., Whincup, P., Morris, R., Lawlor, D.A., Smith, G.D., Timpson, N., Ebrahim, S., Brown, M., Sandhu, M., Reiner, A., Psaty, B., Lange, L., Cushman, M., Tracy, R., Nordestgaard, B.G., Tybjaerg-Hansen, A., Zacho, J., Hung, J., Thompson, P., Beilby, J., Palmer, L.J., Fowkes, G., Lowe, G., Tzoulaki, I., Kumari, M., Overvad, K., Khaw, K.T., Sandhu, M., Benjamin, E., Chiodini, B., Franzosi, M., Norman, P.E., Hankey, G.J., Jamrozik, K., Palmer, L., Rimm, E., Pai, J., Heckbert, S., Bis, J., Yusuf, S., Anand, S., Engort, J., Collins, R., Samani, N.J., Melander, O., Berglund, G., Ladenvall, P., Johansson, L., Jansson, J.H., Hallmans, G., Humphries, S., Manson, J., Saleheen, D., Frossard, P., Sattar, N., Robertson, M., Shepherd, J., Schaefer, E., Hofman, A., Witteman, J.C., Kardys, I., de Faire, U., Bennet, A., O'Reilly, D., McMahon, A., Packard, C., Clarke, R., Greenland, P., Bowden, J., Di Angelantonio, E., Shah, T., Thompson, S., Verzilli, C., Walker, M., Wensley, F. and Whittaker, J. Collaborative pooled analysis of data on C-reactive protein gene variants and coronary disease: judging causality by Mendelian randomisation, European Journal of Epidemiology, 23: pp 531-540 (2008)

Davis, T.M.E., Beilby, J., Davis, W.A., Olynyk, J.K., Jeffrey, G.P., Rossi, E., Boyder, C. and Bruce, D.G. Prevalence, Characteristics, and Prognostic Significance of HFE Gene Mutations in Type 2 Diabetes, Diabetes Care, 31:9, pp 1795-1801 (2008)

Fernandez, S., Stone, S.F., Price, P. and French, M.A.H. The number and function of circulating dendritic cells may limit effector memory CD4+T-cell responses in HIV patients responding to antiretroviral therapy, Clinical Immunology, 128: pp 228-237 (2008)

Foley, B., De Santis, D., Lathbury, L., Christiansen, F. and Witt, C. KIR2DS1-mediated activation overrides NKG2A-mediated inhibition in HLA-C C2-negative individuals, International Immunology, 20:4, pp 555-563 (2008)

Foley, B.A., De Santis, D., Van Beelen, E., Lathbury, L.J., Christiansen, F.T. and Witt, C.S. The reactivity of Bw4sup>+ HLA-B and HLA-A alleles with KIR3DL1: implications for patient and donor suitability for haploidentical stem cell transplantations, Blood, 112:2, pp 435-443 (2008)

Franchina, M., Woo, A.J., Dods, J., Karimi, M., Ho, D., Watanabe, T., Spagnolo, D. and Abraham, L.J. The CD30 gene promoter microsatellite binds transcription factor Yin Yang I (YYI) and shows genetic instability in anaplastic large cell lymphoma, Journal of Pathology, 214: pp 65-74 (2008)

French, M. and Colebunders, R. Immune restoration disease, Current Opinion in HIV and AIDS, 3:4, pp 417-418 (2008)

French, M.A. and Price, P. Immune restoration disease complicating antiretroviral therapy in patients with HIV infection: implications and solutions, Future HIV Therapy, 2:3, pp 263-270 (2008)

Gallego, P.H., Shephard, N., Bulsara, M.K., van Bockxmeer, F.M., Powell, B.L., Beilby, J.P., Arscott, G., Le Page, M., Palmer, L.J., Davis, E.A., Jones, T.W. and Choong, C.S.Y. Angiotensinogen gene T235 variant: a marker for the development of persistent microalbuminuria in children and adolescents with type 1 diabetes mellitus, Journal of Diabetes and its Complications, 22: pp 191-198 (2008)

Gnjec, A., D'Costa, K.J., Laws, S.M., Hedley, R., Balakrishnan, K., Taddei, K., Martins, G., Paton, A., Verdile, G., Gandy, S.E., Broe, G.A., Brooks, W.S., Bennett, H., Piguet, O., Price, P., Miklossy, J., Hallmayer, J., McGeer, P.L. and Martins, R.N. Association of alleles carried at TNFA -850 and BAT1 -22 with Alzheimer's disease, Journal of Neuroinflammation, 5:36 (2008)

Herrmann, S., McKinnon, E., John, M., Hyland, N., Martinez, O.P., Cain, A., Turner, K., Coombs, A., Manolikos, C. and Mallal, S. Evidence-based, multifactorial approach to addressing non-adherence to antiretroviral therapy and improving standards of care, Internal Medicine Journal, 38: pp 8-15 (2008)

Hickling, S.C., Hung, J., Knuiman, M.W., Divitini, M.L. and Beilby, J. Are the associations between diet and C-reactive protein independent of obesity?, Preventive Medicine, 47: pp 71-76 (2008)

Hooper, A.J., Crawford, G.M., Brisbane, J.M., Robertson, K., Watts, G.F., van Bockxmeer, F.M. and Burnett, J.R. Familial lipoprotein lipase deficiency caused by known (G188E) and novel (W394X) LPL gene mutations, Annals of Clinical Biochemistry, 45: pp 102-105 (2008)

Horton, R., Gibson, R., Coggill, P., Miretti, M., Allcock, R.J., Almeida, J., Forbes, S., Gilbert, J.G.R., Halls, K., Harrow, J.L., Hart, E., Howe, K., Jackson, D.K., Palmer, S., Roberts, A.N., Sims, S., Stewart, C.A., Traherne, J.A., Trevanion, S., Wilming, L., Rogers, J., de Jong, P.J., Elliott, J.F., Sawcer, S., Todd, J.A., Trowsdale, J. and Beck, S. Variation analysis and gene annotation of eight MHC haplotypes: The MHC Haplotype Project, Immunogenetics, 60: pp 1-18 (2008)

Hui, J., Oka, A., James, A., Palmer, L.J., Musk, A.W., Beilby, J. and Inoko, H. A genome-wide association scan for asthma in a general Australian population, Human Genetics, 123: pp 297-306 (2008)

Hung, J., Knuiman, M.W., Divitini, M.L., Langton, P.E., Chapman, C.L. and Beilby, J.P. C-Reactive Protein and Interleukin-18 Levels in Relation to Coronary Heart Disease: Prospective Cohort Study from Busselton Western Australia, Heart, Lung and Circulation, 17: pp 90-95 (2008)

Hung, J., McQuillan, B.M., Thompson, P.L. and Beilby, J.P. Circulating adiponectin levels associate with inflammatory markers, insulin resistance and metabolic syndrome independent of obesity, International Journal of Obesity, 32: pp 772-779 (2008)

Hung, J., Knuiman, M.W., Divitini, M.L., Davis, T.M.E. and Beilby, J.P. Prevalence and Risk Factor Correlates of Elevated C-Reactive Protein in an Adult Australian Population, The American Journal of Cardiology, 101: pp 193-198 (2008)

Jones, G.T., Thompson, A.R., van Bockxmeer, F.M., Hafez, H., Cooper, J.A., Golledge, J., Humphries, S.E., Norman, P.E. and van Rij, A.M. Angiotensin II Type 1 Receptor 1166C Polymorphism Is Associated With Abdominal Aortic Aneurysm in Three Independent Cohorts, Arteriosclerosis, Thrombosis, and Vascular Biology, 28: pp 764-770 (2008)

Lautenschlager, N.T., Cox, K.L., Flicker, L., Foster, J.K., van Bockxmeer, F.M., Xiao, J., Greenop, K.R. and Almeida, O.P. Effect of physical activity on cognitive function in older adults at risk for Alzheimer Disease: A randomised trial, JAMA: The Journal of the American Medical Association, 300:9, pp 1027-1037 (2008)

Lee, S., Lindsey-Temple, S.E., Roberts, S. and Price, P. Complex effects of IL1A polymorphism and calpain inhibitors on interleukin 1á (IL-1á) mRNA levels and secretion of IL-1á protein, Tissue Antigens, 72: pp 67-71 (2008)

Lim, A., D'Orsogna, L., Price, P. and French, M.A.H. Imbalanced effector and regulatory cytokine responses may underlie mycobacterial immune restoration disease, AIDS Research and Therapy, 5:9 (2008)

Liyanage, K.E., Hooper, A.J., Defesche, J.C., Burnett, J.R. and van Bockxmeer, F.M. High-resolution melting analysis for detection of familial ligand-defective apolipoprotein B-100 mutations, Annals of Clinical Biochemistry, 45: pp 170-176 (2008)

Maley, M.A., Harvey, J.M., De boer, W.B., Scott, N.W. and Arena, G.E. Addressing current problems in teaching pathology to medical students: blended learning, Medical Teacher, 30: pp e1-e9 (2008)

McCaskie, P.A., Beilby, J.P., Hung, J., Chapman, C.M.L., McQuillan, B.M., Powell, B.L., Thompson, P.L. and Palmer, L.J. 15-Lipoxygenase gene variants are associated with carotid plaque but not carotid intima-media thickness, Human Genetics, 123: pp 445-453 (2008)

Meintjes, G., Lawn, S.D., Scano, F., Maartens, G., French, M.A., Worodria, W., Elliott, J.H., Murdoch, D., Wilkinson, R.J., Seyler, C., John, L., van der Loeff, M.S., Reiss, P., Lynen, L., Janoff, E.N., GIlks, C. and Colebunders, R. Tuberculosis-associated immune reconstitution inflammatory syndrome: case definitions for use in resource-limited settings, The Lancet, 8:August, pp 516-523 (2008)

Needham, M., Hooper, A., James, I., van Bockxmeer, F., Corbett, A., Day, T., Garlepp, M.J. and Mastaglia, F.L. Apolipoprotein å alleles in sporadic inclusion body myositis: A reappraisal, Neuromuscular Disorders, 18: pp 150-152 (2008)

Needham, M., James, I., Corbett, A., Day, T., Christiansen, F., Phillips, B. and Mastaglia, F.L. Sporadic inclusion body myositis: Phenotypic variability and influence of HLA-DR3 in a cohort of 57 Australian cases, Journal of Neurology, Neurosurgery and Psychiatry, 79: pp 1056-1060 (2008)

Oksvold, M.P., Dagger, S.A., Thien, C.B.F. and Langdon, W.Y. The Cbl-b RING finger domain has a limited role in regulating inflammatory cytokine production by IgE-activated mast cells, Molecular Immunology, 45: pp 925-936 (2008)

Pemberton, L.A., Stone, E., Price, P., van Bockxmeer, F. and Brew, B.J. The relationship between ApoE, TNFA, 1L1a, 1L1b and 1L12b genes and HIV-1-associated dementia, HIV Medicine, 9: pp 677-680 (2008)

Powell, B.L., Wiltshire, S., Arscott, G., McCaskie, P.A., Hung, J., McQuillan, B.M., Thompson, P.L., Carter, K.W., Palmer, L.J. and Beilby, J.P. Association of PARL rs3732581 genetic variant with insulin levels, metabolic syndrome and coronary artery disease, Human Genetics, 124: pp 263-270 (2008)

Price, P., Lim, A. and French, M.A.H. Immune reconstitution syndrome is not a single entity, AIDS, 22: p 911 (2008)

Price, P., Fernandez, S., Tan, D.B.A., James, I.R., Keane, N.M. and French, M.A.H. Nadir CD4 T-Cell Counts Continue to Influence Interferon-ã Responses in HIV Patients Who Began Antiretroviral Treatment With Advanced Immunodeficiency, Journal of Acquired Immunodeficiency Syndrome, 49:4, pp 462-464 (2008)

Rathinam, C., Thien, C.B.F., Langdon, W.Y., Gu, H. and Flavell, R.A. The E3 ubiquitin ligase c-Cbl restricts development and functions of hematopoietic stem cells, Genes & Development, 22: pp 992-997 (2008)

Sharkey, A.M., Gardner, L., Hiby, S., Farrell, L., Apps, R., Masters, L., Goodridge, J.P., Lathbury, L., Stewart, C.A., Verma, S. and Moffett, A. Killer Ig-Like Receptor Expression in Uterine NK Cells Is Biased toward Recognition of HLA-C and Alters with Gestational Age, Journal of Immunology, 181: pp 39-46 (2008)

Smallwood, L., Allcock, R., van Bockxmeer, F., Warrington, N., Palmer, L.J., Iacopetta, B., Golledge, J. and Norman, P.E. Polymorphisms of the matrix metalloproteinase 9 gene and abdominal aortic aneurysm, British Journal of Surgery, 95: pp 1239-1244 (2008)

Smallwood, L., Allcock, R., van Bockxmeer, F., Warrington, N., Palmer, L.J., Iacopetta, B. and Norman, P.E. Polymorphisms of the Interleukin-6 Gene Promoter and Abdominal Aortic Aneurysm, European Journal of Vascular and Endovascular Surgery, 35: pp 31-36 (2008)

Tan, D.B.A., Yong, Y.K., Tan, H.Y., Kamarulzaman, A., Tan, L.H., Lim, A., French, M.A.H. and Price, P. Immunological profiles of immune restoration disease presenting as mycobacterial lymphadenitis and cryptococcal meningitis, HIV Medicine, 9: pp 307-316 (2008)

Temple, S.E.L., Cheong, K.Y., Price, P. and Waterer, G.W. The microsatellite, macrophage migration inhibitory factor-794, may influence gene expression in human mononuclear cells stimulated with E.Coli or S. Pneumoniae, International Journal of Immunogenetics, 35: pp 309-136 (2008)

Wade, H., McCoubrie, D.L., Fatovich, D.M., Ryan, J., Vasikaran, S. and Daly, F.F. Correlation of paired plasma and saliva paracetamol levels following deliberate self-poisoning with paracetamol (The Salivary Paracetamol In Toxicology (SPIT) study), Clinical Toxicology, 46:6, pp 534-538 (2008)

Ward, N.C., Tsai, I., Barden, A.E., van Bockxmeer, F.M., Puddey, I.B., Hodgson, J.M. and Croft, K.D. A Single Nucleotide Polymorphism in the CYP4F2 but not CYP4A11 Gene Is Associated With Increased 20-HETE Excretion and Blood Pressure, Hypertension, 51: pp 1393-1398 (2008)

Wiltshire, S., Powell, B.L., Jennens, M., McCaskie, P.A., Carter, K.W., Palmer, L.J., Thompson, P.L., McQuillan, B.M., Hung, J. and Beilby, J.P. Investigating the association between K198N coding polymorphism in EDN1 and hypertension, lipoprotein levels, the metabolic syndrome and cardiovascular disease, Human Genetics, 123: pp 307-313 (2008)

Wood, B.A., Sterrett, G.F., Frost, F. and Swarbrick, N. Diagnosis of extramammary malignancy metastatic to the breast by fine needle biopsy, Pathology, 40:4, pp 345-351 (2008)

Xiao, J., Zhang, F., Wiltshire, S., Hung, J., Jennens, M., Beilby, J.P., Thompson, P.L., McQuillan, B.M., McCaskie, P.A., Carter, K.W., Palmer, L.J. and Powell, B.L. The apolipoprotein AII rs5082 variant is associated with reduced risk of coronary artery disease in an Australian male population, Atherosclerosis, 199: pp 333-339 (2008)

Zheng, L., Sinniah, R. and Hsu, S.I-H. Pathogenic Role of NF-êB Activation in Tubulointerstitial Inflammatory Lesions in Human Lupus Nephritis, Journal of Histochemistry and Cytochemistry, 56:5, pp 517-529 (2008)

Conference Publications

De Santis, D., Foley, B., Witt, C. and Christiansen, F.T. The detection of CD107a on natural killer cells by flow cytometry can be used to detect alloreactive natural killer cells, 22nd European Immunogenetics and Histocompatibility Conference, Denmark, Wiley-Blackwell Munksgaard, 71: p 273 (2008)

Fidler, S., Witt, C. and Christiansen, F.T. Evaluation of the Tepnel Lifecodes DSA assay, 15th International Histocompatibility and Immunogenetics Workshop and Conference, Denmark, Wiley-Blackwell Munksgaard, 72: p 257 (2008)

Needham, M., Scott, A.P., Christiansen, F., James, I., Corbett, A., Day, T., Kiers, L., Laing, N., Allcock, R. and Mastaglia, F.L. HLA alleles and MHC haplotypes in sporadic inclusion body myositis: Frequencies and phenotypic correlations, 13th International Congress of the World Muscle Society, United Kingdom, Elsevier Ltd, 18: pp 770-771 (2008)

Nowak, K.J., Ravenscroft, G., Jackaman, C., Lim, E.M., Sewry, C.A., Potter, A., Squire, S., Fisher, R., Baker, E., Feng, J.J., Marston, S., Fabian, V., Morling, P.J., Bakker, A.J., Griffiths, L.M., Papadimitriou, J.M., Davies, K.E. and Laing, N.G. A mutant skeletal muscle á-actin gene, fused to enhanced green fluorescent protein (EGFP) produces a unique myopathic mouse model, 13th International Congress of the World Muscle Society, United Kingdom, Elsevier Ltd, 18: pp 785-786 (2008)

Others

Harvey, J. Hormone receptor assays and other prognostic and predictive factors, The pathology reporting of breast cancer: a guide for pathologists, surgeons, radiologists and oncologists, New South Wales, Australia (2008)

Vasikaran, S.D. (Review)Utility of biochemical markers of bone turnover and bone mineral density in management of osteoporosis, 45:2, pp 221-258, United Kingdom (2008)