Plant Energy Biology, ARC Centre for

Books and Chapters

Clifton, R. and Whelan, J.M. Plant Mitochondrial Transcriptomics by Quantitative RT-PCR, Mitochondria Practical Protocols, ed Dario Lester, Johannes M. Herrmann, USA, Humana Press, 372: pp 529-542 (2007)

Glaser, E. and Whelan, J.M. Import of Nuclear-Encoded Mitochondrial Proteins, Plant Mitochondria, ed D.C. Logan, online, Blackwell Publishing, 31: pp 97-128 (2007)

Heazlewood, J.L. and Millar, A.H. Arabidopsis Mitochondrial Proteomics, Mitochondria Practical Protocols, ed Dario Lester, Johannes M. Herrmann, USA, Humana Press, 372: pp 559-571 (2007)

Millar, A.H., Liddell, A. and Leaver, C.J. Isolation and Subfractionation of Mitochondria from Plants, Methods in Cell Biology, ed Liza A. Pon, Eric A. Schon, USA, Elsevier, 80: pp 65-90 (2007)

Taylor, N.L. and Millar, A.H. Oxidative Stress and Plant Mitochondria, Methods in Molecular Biology, ed Dario Lester, Johannes M. Herrmann, USA, Humana Press, 372: pp 389-403 (2007)

Journal Articles

Andres, C., Lurin, C. and Small, I. The multifarious roles of PPR proteins in plant mitochondrial gene expression, Physiologia Plantarum, 129: pp 14-22 (2007)

Chateigner-Boutin, A. and Small, I. A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons, Nucleic Acids Research, 35:17, p e114 (2007)

Delannoy, E., Stanley, W., Bond, C.S. and Small, I. Pentatricopeptide repeat (PPR) proteins as sequence-specificity factors in post-transcriptional processes in organelles, Biochemical Society Transactions, 35:Part 6, pp 1643-1647 (2007)

Edner, C., Li, J., Albrecht, T., Mahlow, S., Hejazi, M., Hussain, H., Kaplan, F., Guy, C., Smith, S.M., Steup, M. and Ritte, G. Glucan, Water Dikinase Activity Stimulates Breakdown of Starch Granules by Plastidial ß-Amylases, Plant Physiology, 145:1, pp 17-28 (2007)

Eubel, H., Lee, C.P., Kuo, J.J., Meyer, E., Taylor, N.L. and Millar, A.H. Free-flow electrophoresis for purification of plant mitochondria by surface charge, The Plant Journal, 52: pp 583-594 (2007)

Falcon de Longevialle, A., Meyer, E., Andres, C., Taylor, N.L., Lurin, C., Millar, A.H. and Small, I. The Pentatricopeptide Repeat Gene OTP43 Is Required for trans-Splicing of the Mitochondrial nad1 Intron 1 in Arabidopsis thaliana, The Plant Cell, 19: pp 3256-3265 (2007)

Geisler-Lee, J., O'Toole, N.J., Ammar, R., Provart, N.J., Millar, A.H. and Geisler, M. A Predicted Interactome for Arabidopsis, Plant Physiology, 145:2, pp 317-329 (2007)

Ho, L., Giraud, E.J., Lister, R.M., Thirkettle-Watts, D., Low, J.L.M., Clifton, R., Howell, K.A., Carrie, C.J., Donald, T. and Whelan, J.M. Characterization of the Regulatory and Expression Context of an Alternative Oxidase Gene Provides Insights into Cyanide-Insensitive Respiration during Growth and Development, Plant Physiology, 143:4, pp 1519-1533 (2007)

Howell, K.A., Millar, A.H. and Whelan, J.M. Building the Powerhouse. What are the Signals Involved in Plant Mitochondrial Biogenesis?, Plant Signalling & Behavior, 2:5, pp 311-313 (2007)

Howell, K.A., Cheng, K., Murcha, M.W., Jenkin, L.E., Millar, A.H. and Whelan, J.M. Oxygen Initiation of Respiration and Mitochondrial Biogenesis in Rice, The Journal of Biological Chemistry, 282:21, pp 15619-15631 (2007)

Ito, J., Heazlewood, J.L. and Millar, A.H. The plant mitochondrial proteome and the challenge of defining the post-translational modifications responsible for signalling and stress effects on respiratory functions, Physiologia Plantarum, 129: pp 207-224 (2007)

Legen, J., Wanner, G., Herrmann, R.G., Small, I. and Schmitz-Linneweber, C. Plastic tRNA Genes trnC-GCA and trnN-GUU are essential for plant cell development, The Plant Journal, 51: pp 751-762 (2007)

Lister, R.M., Carrie, C.J., Duncan, O.R., Ho, L., Howell, K.A., Murcha, M.W. and Whelan, J.M. Functional Definition of Outer Membrane Proteins Involved in Preprotein Import into Mitochondria, The Plant Cell, 19: pp 3739-3759 (2007)

Maliga, P. and Small, I. Plant biotechnology 2007: all three genomes make contributions to progress, Current Opinion in Biotechnology, 18:2, pp 97-99 (2007)

Meyer, E., Heazlewood, J.L. and Millar, A.H. Mitochondrial acyl carrier proteins in Arabidopsis thaliana are predominantly soluble matrix proteins and none can be confirmed as subunits of respiratory Complex I, Plant Molecular Biology, 64: pp 319-327 (2007)

Murcha, M.W., Elhafez, D., Lister, R.M., Tonti-Filippini, J.S., Baumgarnter, M., Philippar, K., Carrie, C.J., Mokranjac, D., Soll, J. and Whelan, J.M. Characterization of the Preprotein and Amino Acid Transport Gene Family in Arabidopsis, Plant Physiology, 143:1, pp 199-212 (2007)

Narsai, R.N., Howell, K.A., Millar, A.H., O'toole, N.J., Small, I. and Whelan, J.M. Genome-Wide Analysis of mRNA Decay Rates and Their Determinants in Arabidopsis thaliana, The Plant Cell, 19: pp 3418-3436 (2007)

Olejnik, K., Murcha, M.W., Whelan, J.M. and Kraszewska, E. Cloning and characterization of AtNUDT13, a novel mitochondrial Arabidopsis thaliana Nudix hydrolase specific for long-chain diadenosine polyphosphates, FEBS Journal, 274: pp 4877-4885 (2007)

Pracharoenwattana, I., Cornah, J.E. and Smith, S.M. Arabidopsis peroxisomal malate dehydrogenase functions in %szlig;-oxidation but not in the glyoxylate cycle, The Plant Journal, 50: pp 381-390 (2007)

Pusnik, M., Small, I., Read, L.K., Fabbro, T. and Schneider, A. Pentatricopeptide Repeat Proteins in Trypanosoma brucei Funtion in Mitochondrial Ribosomes, Molecular & Cellular Biology, 27:19, pp 6876-6888 (2007)

Rossel, J.B., Wilson, P.B., Hussain, D., Wood, N.S., Gordon, M.T., Mewett, O.P., Howell, K.A., Whelan, J.M., Kazan, K. and Pogson, B.J. Systemic and Intracellular Responses to Photooxidative Stress in Arabidopsis, The Plant Cell, 19: pp 4091-41110 (2007)

Salone, V., Rudinger, M., Polsakiewicz, M., Hoffmann, B., Groth-Malonek, M., Szurek, B., Small, I., Knoop, V. and Lurin, C. A hypothesis on the identification of the editing enzyme in plant organelles, FEBS letters, 581:22, pp 4132-4138 (2007)

Small, I. RNAi for revealing and engineering plant gene functions, Current Opinion in Biotechnology, 18:2, pp 148-153 (2007)

Smith, S., Zeeman, S.C. and Smith, A.M. The diurnal metabolism of leaf starch, Biochem J, 401: pp 13-28 (2007)

Stanley, W., Fodor, K., Marti-Renom, M.A., Schliebs, W. and Wilmanns, M. Protein translocation intoperoxisomes by ring-shaped import receptors, FEBS letters, 581: pp 4795-4802 (2007)

Stanley, W. Advances in structural biology and structure prediction, CURRENT SCIENCE, 93:6, pp 755-757 (2007)

Thatcher, L., Carrie, C.J., Andersson, C.R., Sivasithamparam, K., Whelan, J.M. and Singh, K.B. Differential Gene Expression and Subcellular Targeting of Arabidopsis Glutathione S-Transferase F8 is Achieved through Alternative Transcription Start Sites, The Journal of Biological Chemistry, 282:39, p 28928 (2007)

Winger, A.M., Taylor, N.L., Heazlewood, J.L., Day, D.A. and Millar, A.H. The Cytotoxic Lipid Peroxidation Product 4-Hydroxy-2-nonenal Covalently Modifies a Selective Range of Proteins Linked to Respiratory Function in Plant Mitochondria, The Journal of Biological Chemistry, 282:52, pp 37436-37447 (2007)

Winger, A.M., Taylor, N.L., Heazlewood, J.L., Day, D.A. and Millar, A.H. Identification of intra- and intermolecular disulphide bonding in the plant mitochondrial proteome by diagonal gel electrophoresis, Proteomics, 7: pp 4158-4170 (2007)